CRAN Package Check Results for Package spectralAnalysis

Last updated on 2023-12-01 07:50:21 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 4.3.1 19.93 296.00 315.93 NOTE
r-devel-linux-x86_64-debian-gcc 4.3.1 16.12 185.02 201.14 NOTE
r-devel-linux-x86_64-fedora-clang 4.3.1 444.46 NOTE
r-devel-linux-x86_64-fedora-gcc 4.3.1 396.87 NOTE
r-devel-windows-x86_64 4.3.1 18.00 203.00 221.00 NOTE
r-patched-linux-x86_64 4.3.1 14.83 258.77 273.60 OK
r-release-linux-x86_64 4.3.1 12.52 273.84 286.36 OK
r-release-macos-arm64 4.3.1 82.00 WARN
r-release-macos-x86_64 4.3.1 253.00 WARN
r-release-windows-x86_64 4.3.1 25.00 349.00 374.00 NOTE
r-oldrel-macos-arm64 4.3.1 78.00 WARN
r-oldrel-macos-x86_64 4.3.1 122.00 WARN
r-oldrel-windows-x86_64 4.3.1 26.00 288.00 314.00 NOTE

Check Details

Version: 4.3.1
Check: Rd files
Result: NOTE checkRd: (-1) SpectraInTime-class.Rd:66: Lost braces 66 | \item{colors}{colorblind friendly palettes are used from the de \code{\link[viridis]{viridis_pal}} choice between code{"A"} (magna), | ^ checkRd: (-1) SpectraInTime-class.Rd:67: Lost braces 67 | code{"B"} (inferno), \code{"C"} (plasma) and \code{"D"} the default viridis color palette} | ^ checkRd: (-1) addPreprocessingStep.Rd:17: Lost braces 17 | code{\link{SpectraInTime-class}} | ^ checkRd: (-1) baselineCorrect.Rd:24: Lost braces 24 | \item{degree}{numeric value, degree of the polynomial used only if \code{method} is code{'modpolyfit'}} | ^ checkRd: (-1) scatterCorrect.Rd:19: Lost braces 19 | \item{referenceSpectra}{the reference spectra when not derived from the current data, defaults to code{NULL} when \code{referenceMethod} is used | ^ checkRd: (-1) spectralIntegration.Rd:19: Lost braces 19 | \item{smoothingValue}{numeric value between 0 and 1, amount of code{\link[stats]{lowess}}-smoothing, | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 4.3.1
Check: Rd \usage sections
Result: NOTE Documented arguments not in \usage in Rd file 'changeDevSettings.Rd': ‘defaultsSettings’ Documented arguments not in \usage in Rd file 'checkMethod.Rd': ‘allowedMethod’ Documented arguments not in \usage in Rd file 'convertListToS4.Rd': ‘names’ Functions with \usage entries need to have the appropriate \alias entries, and all their arguments documented. The \usage entries must correspond to syntactically valid R code. See chapter ‘Writing R documentation files’ in the ‘Writing R Extensions’ manual. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64

Version: 4.3.1
Check: installed package size
Result: NOTE installed size is 6.3Mb sub-directories of 1Mb or more: doc 4.8Mb Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 4.3.1
Check: for missing documentation entries
Result: WARN Undocumented S4 methods: generic '[' and siglist 'SpectraInTime,ANY,missing,ANY' generic '[' and siglist 'SpectraInTime,missing,ANY,ANY' generic '[' and siglist 'SpectraInTime,missing,missing,ANY' generic '[' and siglist 'SpectraInTimeComp,ANY,ANY,ANY' generic '[' and siglist 'SpectraInTimeComp,ANY,missing,ANY' generic '[' and siglist 'SpectraInTimeComp,missing,ANY,ANY' All user-level objects in a package (including S4 classes and methods) should have documentation entries. See chapter ‘Writing R documentation files’ in the ‘Writing R Extensions’ manual. Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64